The Communities and Local Government Secretary Eric Pickles said he "entirely agreed" with Prince Charles's criticism about authorities' response to the floods.
He said: "I think people were surprised...but as soon as were alerted by the authorities we acted promptly."
However, Mr Pickles would not be drawn in to if it were the Government or the Environment Agency who 'took so long' to react to the floods.
Earlier this week Prince Charles said the "tragedy" in flood-hit Somerset "is that nothing happened for so long" to help as he met local residents, farmers and emergency services personnel who have been affected.
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During their visit, Charles and Camilla will meet local businesses and people in the city centre before joining a reception in the Guildhall