Pupils at Golden Hillock school in Birmingham were allegedly shown images of jihad "in a classroom setting", including rockets being launched and battlefields.
It is one of a number of claims in a Government-commissioned report on the 'Trojan Horse' allegations of a hardline Muslim takeover of Birmingham schools
The report also says that staff at Park View View school invited extremist preacher Shaykh Shady Al-Suleiman to address pupils in assembly.
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The boy was reportedly only discovered missing when the bus returned to the school and the boy's mum was waiting for him.